BLASTGrabber: a bioinformatic tool for visualization, analysis and sequence selection of massive BLAST data.

Abstract Text

Advances in sequencing efficiency have vastly increased the sizes of biological sequence databases, including many thousands of genome-sequenced species. The BLAST algorithm remains the main search engine for retrieving sequence information, and must consequently handle data on an unprecedented scale. This has been possible due to high-performance computers and parallel processing. However, the raw BLAST output from contemporary searches involving thousands of queries becomes ill-suited for direct human processing. Few programs attempt to directly visualize and interpret BLAST output; those that do often provide a mere basic structuring of BLAST data.

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2016-09-08 12:35:06

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Citation:- Neumann RS, Kumar RS, Haverkamp RS, Shalchian-Tabrizi RS, .BLASTGrabber: a bioinformatic tool for visualization, analysis and sequence selection of massive BLAST data. BMC bioinformatics 2014-;15()128 DOI:10.1186/1471-2105-15-128

Link to original article


Details of Journal

Journal Title - BMC bioinformatics

ISSN - 1471-2105

Volume - 15

Issue - 0

Publish date - 2014-

Language - eng

Country - England


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